Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
GCNT1Q02742 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.39■□□□□ 0.7
GCNT1Q02742 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.39■□□□□ 0.7
GCNT1Q02742 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCNT1Q02742 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.39■□□□□ 0.7
GCNT1Q02742 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GCNT1Q02742 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.39■□□□□ 0.69
GCNT1Q02742 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.39■□□□□ 0.69
GCNT1Q02742 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.39■□□□□ 0.69
GCNT1Q02742 LINC01238-205ENST00000567549 1107 ntBASIC19.39■□□□□ 0.69
GCNT1Q02742 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.39■□□□□ 0.69
GCNT1Q02742 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GCNT1Q02742 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.39■□□□□ 0.69
GCNT1Q02742 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.39■□□□□ 0.69
GCNT1Q02742 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.39■□□□□ 0.69
GCNT1Q02742 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.39■□□□□ 0.69
GCNT1Q02742 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.39■□□□□ 0.69
GCNT1Q02742 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GCNT1Q02742 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GCNT1Q02742 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GCNT1Q02742 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GCNT1Q02742 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCNT1Q02742 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 LINC01311-201ENST00000565162 1445 ntBASIC19.38■□□□□ 0.69
GCNT1Q02742 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.38■□□□□ 0.69
GCNT1Q02742 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
GCNT1Q02742 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
GCNT1Q02742 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCNT1Q02742 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GCNT1Q02742 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
GCNT1Q02742 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.37■□□□□ 0.69
GCNT1Q02742 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.37■□□□□ 0.69
GCNT1Q02742 KRT18P65-201ENST00000439811 1286 ntBASIC19.37■□□□□ 0.69
GCNT1Q02742 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.37■□□□□ 0.69
GCNT1Q02742 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.37■□□□□ 0.69
GCNT1Q02742 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.37■□□□□ 0.69
GCNT1Q02742 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
GCNT1Q02742 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GCNT1Q02742 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.37■□□□□ 0.69
GCNT1Q02742 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GCNT1Q02742 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCNT1Q02742 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.37■□□□□ 0.69
GCNT1Q02742 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GCNT1Q02742 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.37■□□□□ 0.69
GCNT1Q02742 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
GCNT1Q02742 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.36■□□□□ 0.69
GCNT1Q02742 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms