Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 AC073912.3-201ENST00000624414 853 ntBASIC18.33■□□□□ 0.52
PRAMEP78395 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 AC133561.5-201ENST00000635547 218 ntBASIC18.33■□□□□ 0.52
PRAMEP78395 AC092865.7-201ENST00000641832 219 ntBASIC18.33■□□□□ 0.52
PRAMEP78395 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.33■□□□□ 0.52
PRAMEP78395 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEP78395 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEP78395 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEP78395 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEP78395 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 LIN28AP1-201ENST00000429574 405 ntBASIC18.32■□□□□ 0.52
PRAMEP78395 SLC25A3P1-201ENST00000443844 931 ntBASIC18.32■□□□□ 0.52
PRAMEP78395 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEP78395 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 PHGDH-209ENST00000641074 1780 ntBASIC18.32■□□□□ 0.52
PRAMEP78395 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEP78395 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 AL096828.2-201ENST00000567259 1965 ntBASIC18.31■□□□□ 0.52
PRAMEP78395 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEP78395 ATP5G1P1-201ENST00000448724 379 ntBASIC18.31■□□□□ 0.52
PRAMEP78395 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEP78395 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEP78395 AC141257.4-201ENST00000634557 245 ntBASIC18.31■□□□□ 0.52
PRAMEP78395 AC136944.6-201ENST00000634818 245 ntBASIC18.31■□□□□ 0.52
PRAMEP78395 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEP78395 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEP78395 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEP78395 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms