Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SNRPEP62304 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SNRPEP62304 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNRPEP62304 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SNRPEP62304 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SNRPEP62304 AC093010.1-201ENST00000473625 1624 ntBASIC13.94□□□□□ -0.18
SNRPEP62304 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNRPEP62304 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SNRPEP62304 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SNRPEP62304 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SNRPEP62304 KRT8P17-201ENST00000453110 1448 ntBASIC13.94□□□□□ -0.18
SNRPEP62304 AL499627.1-201ENST00000569373 2188 ntBASIC13.94□□□□□ -0.18
SNRPEP62304 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.94□□□□□ -0.18
SNRPEP62304 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNRPEP62304 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.94□□□□□ -0.18
SNRPEP62304 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.94□□□□□ -0.18
SNRPEP62304 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNRPEP62304 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.94□□□□□ -0.18
SNRPEP62304 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.93□□□□□ -0.18
SNRPEP62304 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.93□□□□□ -0.18
SNRPEP62304 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SNRPEP62304 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13.93□□□□□ -0.18
SNRPEP62304 DUX4L9-201ENST00000449051 1259 ntBASIC13.93□□□□□ -0.18
SNRPEP62304 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SNRPEP62304 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 AC016575.1-201ENST00000607026 382 ntBASIC13.93□□□□□ -0.18
SNRPEP62304 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.93□□□□□ -0.18
SNRPEP62304 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
SNRPEP62304 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNRPEP62304 AC138035.3-201ENST00000622706 2791 ntBASIC13.93□□□□□ -0.18
SNRPEP62304 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms