Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB5BP61020 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.23□□□□□ -0.13
RAB5BP61020 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 KRT125P-201ENST00000546827 989 ntBASIC14.23□□□□□ -0.13
RAB5BP61020 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5BP61020 AC053503.5-201ENST00000601508 636 ntBASIC14.23□□□□□ -0.13
RAB5BP61020 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5BP61020 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB5BP61020 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5BP61020 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB5BP61020 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.23□□□□□ -0.13
RAB5BP61020 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB5BP61020 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB5BP61020 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB5BP61020 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB5BP61020 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB5BP61020 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB5BP61020 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5BP61020 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5BP61020 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RAB5BP61020 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB5BP61020 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5BP61020 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB5BP61020 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB5BP61020 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB5BP61020 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB5BP61020 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RAB5BP61020 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB5BP61020 AL513523.2-202ENST00000427283 2040 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms