Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
VSX2P58304 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.37■□□□□ 0.37
VSX2P58304 AC004263.2-201ENST00000617183 678 ntBASIC17.37■□□□□ 0.37
VSX2P58304 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VSX2P58304 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.37■□□□□ 0.37
VSX2P58304 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 AL353692.3-201ENST00000407031 1396 ntBASIC17.37■□□□□ 0.37
VSX2P58304 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
VSX2P58304 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VSX2P58304 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.36■□□□□ 0.37
VSX2P58304 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.36■□□□□ 0.37
VSX2P58304 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 CHCHD2P8-201ENST00000429873 447 ntBASIC17.36■□□□□ 0.37
VSX2P58304 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.36■□□□□ 0.37
VSX2P58304 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.36■□□□□ 0.37
VSX2P58304 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.36■□□□□ 0.37
VSX2P58304 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VSX2P58304 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VSX2P58304 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.35■□□□□ 0.37
VSX2P58304 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.35■□□□□ 0.37
VSX2P58304 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.35■□□□□ 0.37
VSX2P58304 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.35■□□□□ 0.37
VSX2P58304 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.35■□□□□ 0.37
VSX2P58304 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.35■□□□□ 0.37
VSX2P58304 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.35■□□□□ 0.37
VSX2P58304 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.35■□□□□ 0.37
VSX2P58304 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
VSX2P58304 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.35■□□□□ 0.37
VSX2P58304 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSX2P58304 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.35■□□□□ 0.37
VSX2P58304 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.35■□□□□ 0.37
VSX2P58304 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.34■□□□□ 0.37
VSX2P58304 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.34■□□□□ 0.37
VSX2P58304 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.34■□□□□ 0.37
VSX2P58304 HCG4P8-203ENST00000443049 980 ntBASIC17.34■□□□□ 0.37
VSX2P58304 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.34■□□□□ 0.37
VSX2P58304 KRT18P1-202ENST00000452408 1331 ntBASIC17.34■□□□□ 0.37
VSX2P58304 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.34■□□□□ 0.37
VSX2P58304 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.34■□□□□ 0.37
VSX2P58304 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VSX2P58304 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
VSX2P58304 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VSX2P58304 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms