Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN20P56880 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN20P56880 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLDN20P56880 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CLDN20P56880 AC112907.2-201ENST00000448639 330 ntBASIC16.66■□□□□ 0.26
CLDN20P56880 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN20P56880 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 MIR3917-201ENST00000580971 93 ntBASIC16.66■□□□□ 0.26
CLDN20P56880 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN20P56880 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.66■□□□□ 0.26
CLDN20P56880 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 AC099343.3-201ENST00000605834 2503 ntBASIC16.66■□□□□ 0.26
CLDN20P56880 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN20P56880 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLDN20P56880 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN20P56880 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN20P56880 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CLDN20P56880 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN20P56880 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CLDN20P56880 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLDN20P56880 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN20P56880 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN20P56880 AL031133.1-201ENST00000406807 723 ntBASIC16.65■□□□□ 0.26
CLDN20P56880 AL671277.2-201ENST00000458060 996 ntBASIC16.65■□□□□ 0.26
CLDN20P56880 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN20P56880 KRT18P41-201ENST00000518924 1277 ntBASIC16.65■□□□□ 0.26
CLDN20P56880 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CLDN20P56880 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN20P56880 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN20P56880 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN20P56880 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN20P56880 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN20P56880 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN20P56880 ANO7L1-203ENST00000602586 1720 ntBASIC16.65■□□□□ 0.26
CLDN20P56880 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN20P56880 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLDN20P56880 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN20P56880 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN20P56880 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN20P56880 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN20P56880 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 AC092597.1-201ENST00000487352 616 ntBASIC16.64■□□□□ 0.25
CLDN20P56880 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN20P56880 HYMAI.1-201ENST00000620949 238 ntBASIC16.64■□□□□ 0.25
CLDN20P56880 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN20P56880 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN20P56880 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN20P56880 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLDN20P56880 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN20P56880 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN20P56880 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CLDN20P56880 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN20P56880 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN20P56880 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN20P56880 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDN20P56880 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN20P56880 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN20P56880 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms