Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL024508.2-201ENST00000607749 1894 ntBASIC13.53□□□□□ -0.24
CMC4P56277 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.52□□□□□ -0.24
CMC4P56277 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMC4P56277 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CMC4P56277 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 KRT18P65-201ENST00000439811 1286 ntBASIC13.52□□□□□ -0.25
CMC4P56277 VENTXP7-201ENST00000475503 772 ntBASIC13.52□□□□□ -0.25
CMC4P56277 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.52□□□□□ -0.25
CMC4P56277 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.52□□□□□ -0.25
CMC4P56277 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.52□□□□□ -0.25
CMC4P56277 AC009154.2-201ENST00000621177 724 ntBASIC13.52□□□□□ -0.25
CMC4P56277 AC116407.4-201ENST00000623319 1061 ntBASIC13.52□□□□□ -0.25
CMC4P56277 AL353692.3-201ENST00000407031 1396 ntBASIC13.52□□□□□ -0.25
CMC4P56277 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.52□□□□□ -0.25
CMC4P56277 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMC4P56277 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CMC4P56277 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
CMC4P56277 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CMC4P56277 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.51□□□□□ -0.25
CMC4P56277 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CMC4P56277 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CMC4P56277 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 AC005332.1-201ENST00000577698 1310 ntBASIC13.51□□□□□ -0.25
CMC4P56277 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 TSPY22P-201ENST00000427496 604 ntBASIC13.51□□□□□ -0.25
CMC4P56277 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.51□□□□□ -0.25
CMC4P56277 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.51□□□□□ -0.25
CMC4P56277 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.51□□□□□ -0.25
CMC4P56277 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.51□□□□□ -0.25
CMC4P56277 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.51□□□□□ -0.25
CMC4P56277 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMC4P56277 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CMC4P56277 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CMC4P56277 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CMC4P56277 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.5□□□□□ -0.25
CMC4P56277 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.5□□□□□ -0.25
CMC4P56277 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
CMC4P56277 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 DUTP2-201ENST00000519164 463 ntBASIC13.5□□□□□ -0.25
CMC4P56277 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.5□□□□□ -0.25
CMC4P56277 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 AL390719.2-201ENST00000606993 987 ntBASIC13.5□□□□□ -0.25
CMC4P56277 IGHV3-41-201ENST00000613121 348 ntBASIC13.5□□□□□ -0.25
CMC4P56277 AC116407.2-201ENST00000613639 860 ntBASIC13.5□□□□□ -0.25
CMC4P56277 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms