Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC130371.2-201ENST00000619443 611 ntBASIC16.67■□□□□ 0.26
CDH11P55287 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 MYLKP1-201ENST00000509077 1580 ntBASIC16.67■□□□□ 0.26
CDH11P55287 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH11P55287 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDH11P55287 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH11P55287 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH11P55287 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH11P55287 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 RCC2P3-201ENST00000418112 1537 ntBASIC16.65■□□□□ 0.26
CDH11P55287 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH11P55287 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH11P55287 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH11P55287 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH11P55287 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 TERF1P1-201ENST00000311003 1181 ntBASIC16.65■□□□□ 0.26
CDH11P55287 ATP5G1P1-201ENST00000448724 379 ntBASIC16.65■□□□□ 0.26
CDH11P55287 AC128688.1-201ENST00000487626 519 ntBASIC16.65■□□□□ 0.26
CDH11P55287 EGLN1P1-201ENST00000531623 762 ntBASIC16.65■□□□□ 0.26
CDH11P55287 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH11P55287 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH11P55287 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH11P55287 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH11P55287 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH11P55287 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.64■□□□□ 0.26
CDH11P55287 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDH11P55287 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH11P55287 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH11P55287 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDH11P55287 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 TSPY14P-201ENST00000303979 915 ntBASIC16.64■□□□□ 0.25
CDH11P55287 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH11P55287 LIN28AP1-201ENST00000429574 405 ntBASIC16.64■□□□□ 0.25
CDH11P55287 AC008040.2-201ENST00000461049 708 ntBASIC16.64■□□□□ 0.25
CDH11P55287 AC091390.4-202ENST00000476426 537 ntBASIC16.64■□□□□ 0.25
CDH11P55287 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDH11P55287 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 FLJ13224-201ENST00000313737 1514 ntBASIC16.64■□□□□ 0.25
CDH11P55287 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH11P55287 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDH11P55287 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH11P55287 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH11P55287 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH11P55287 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH11P55287 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms