Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.39■□□□□ 0.7
RAD23BP54727 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
RAD23BP54727 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RAD23BP54727 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD23BP54727 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD23BP54727 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD23BP54727 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.39■□□□□ 0.69
RAD23BP54727 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.39■□□□□ 0.69
RAD23BP54727 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RAD23BP54727 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD23BP54727 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD23BP54727 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.39■□□□□ 0.69
RAD23BP54727 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.39■□□□□ 0.69
RAD23BP54727 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.39■□□□□ 0.69
RAD23BP54727 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.39■□□□□ 0.69
RAD23BP54727 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 AC020916.1-201ENST00000587762 1774 ntBASIC19.39■□□□□ 0.69
RAD23BP54727 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 AL096828.2-201ENST00000567259 1965 ntBASIC19.39■□□□□ 0.69
RAD23BP54727 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD23BP54727 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
RAD23BP54727 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.38■□□□□ 0.69
RAD23BP54727 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.38■□□□□ 0.69
RAD23BP54727 PCDHB18P-201ENST00000524813 2368 ntBASIC19.38■□□□□ 0.69
RAD23BP54727 AL136038.3-201ENST00000561909 1096 ntBASIC19.38■□□□□ 0.69
RAD23BP54727 AC087388.1-201ENST00000571370 1112 ntBASIC19.38■□□□□ 0.69
RAD23BP54727 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RAD23BP54727 AC090340.1-201ENST00000620778 4980 ntBASIC19.38■□□□□ 0.69
RAD23BP54727 AL121956.5-201ENST00000625261 221 ntBASIC19.38■□□□□ 0.69
RAD23BP54727 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.38■□□□□ 0.69
RAD23BP54727 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.38■□□□□ 0.69
RAD23BP54727 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAD23BP54727 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD23BP54727 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAD23BP54727 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.37■□□□□ 0.69
RAD23BP54727 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAD23BP54727 ABALON-201ENST00000629058 1903 ntBASIC19.37■□□□□ 0.69
RAD23BP54727 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RAD23BP54727 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAD23BP54727 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 KRT18P48-201ENST00000434763 852 ntBASIC19.37■□□□□ 0.69
RAD23BP54727 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 FAM86EP-206ENST00000510506 987 ntBASIC19.37■□□□□ 0.69
RAD23BP54727 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.37■□□□□ 0.69
RAD23BP54727 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.37■□□□□ 0.69
RAD23BP54727 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD23BP54727 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RAD23BP54727 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RAD23BP54727 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD23BP54727 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RAD23BP54727 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 AC093010.1-201ENST00000473625 1624 ntBASIC19.36■□□□□ 0.69
RAD23BP54727 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.36■□□□□ 0.69
RAD23BP54727 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAD23BP54727 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.36■□□□□ 0.69
RAD23BP54727 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAD23BP54727 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms