Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 AP000523.1-201ENST00000398242 1049 ntBASIC18.32■□□□□ 0.52
LIMK2P53671 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.32■□□□□ 0.52
LIMK2P53671 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.32■□□□□ 0.52
LIMK2P53671 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.32■□□□□ 0.52
LIMK2P53671 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.32■□□□□ 0.52
LIMK2P53671 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.32■□□□□ 0.52
LIMK2P53671 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
LIMK2P53671 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
LIMK2P53671 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.32■□□□□ 0.52
LIMK2P53671 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LIMK2P53671 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.32■□□□□ 0.52
LIMK2P53671 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
LIMK2P53671 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 LINC00896-202ENST00000609602 2128 ntBASIC18.31■□□□□ 0.52
LIMK2P53671 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.31■□□□□ 0.52
LIMK2P53671 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 UPK3BP1-201ENST00000428678 509 ntBASIC18.31■□□□□ 0.52
LIMK2P53671 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.31■□□□□ 0.52
LIMK2P53671 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.31■□□□□ 0.52
LIMK2P53671 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.31■□□□□ 0.52
LIMK2P53671 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LIMK2P53671 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 AC009102.3-201ENST00000623118 1491 ntBASIC18.31■□□□□ 0.52
LIMK2P53671 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.31■□□□□ 0.52
LIMK2P53671 HOXB1-202ENST00000577092 1414 ntBASIC18.31■□□□□ 0.52
LIMK2P53671 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LIMK2P53671 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 AC099343.3-201ENST00000605834 2503 ntBASIC18.3■□□□□ 0.52
LIMK2P53671 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.3■□□□□ 0.52
LIMK2P53671 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.3■□□□□ 0.52
LIMK2P53671 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 MIR149-201ENST00000384879 89 ntBASIC18.3■□□□□ 0.52
LIMK2P53671 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.3■□□□□ 0.52
LIMK2P53671 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LIMK2P53671 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 AL121956.5-201ENST00000625261 221 ntBASIC18.3■□□□□ 0.52
LIMK2P53671 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LIMK2P53671 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIMK2P53671 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LIMK2P53671 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.29■□□□□ 0.52
LIMK2P53671 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.29■□□□□ 0.52
LIMK2P53671 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms