Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 AP000997.3-201ENST00000623333 2250 ntBASIC19.88■□□□□ 0.77
CDR1P51861 NOC2LP1-202ENST00000452600 2235 ntBASIC19.88■□□□□ 0.77
CDR1P51861 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.88■□□□□ 0.77
CDR1P51861 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDR1P51861 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.87■□□□□ 0.77
CDR1P51861 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDR1P51861 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.87■□□□□ 0.77
CDR1P51861 AC104581.1-202ENST00000635932 2618 ntBASIC19.87■□□□□ 0.77
CDR1P51861 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDR1P51861 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.87■□□□□ 0.77
CDR1P51861 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 UPK3BP1-201ENST00000428678 509 ntBASIC19.87■□□□□ 0.77
CDR1P51861 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.87■□□□□ 0.77
CDR1P51861 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.87■□□□□ 0.77
CDR1P51861 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CDR1P51861 LINC01238-205ENST00000567549 1107 ntBASIC19.87■□□□□ 0.77
CDR1P51861 MIR3180-5-201ENST00000583743 153 ntBASIC19.87■□□□□ 0.77
CDR1P51861 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDR1P51861 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDR1P51861 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
CDR1P51861 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.86■□□□□ 0.77
CDR1P51861 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.86■□□□□ 0.77
CDR1P51861 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.86■□□□□ 0.77
CDR1P51861 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
CDR1P51861 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.86■□□□□ 0.77
CDR1P51861 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
CDR1P51861 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 FAM86EP-206ENST00000510506 987 ntBASIC19.86■□□□□ 0.77
CDR1P51861 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDR1P51861 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.86■□□□□ 0.77
CDR1P51861 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 AL031432.5-201ENST00000641059 760 ntBASIC19.86■□□□□ 0.77
CDR1P51861 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CDR1P51861 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDR1P51861 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.86■□□□□ 0.77
CDR1P51861 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDR1P51861 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDR1P51861 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.86■□□□□ 0.77
CDR1P51861 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR1P51861 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR1P51861 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 PCED1CP-201ENST00000419887 785 ntBASIC19.85■□□□□ 0.77
CDR1P51861 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR1P51861 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDR1P51861 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.85■□□□□ 0.77
CDR1P51861 AC083849.1-201ENST00000615227 514 ntBASIC19.85■□□□□ 0.77
CDR1P51861 HYMAI.1-201ENST00000620949 238 ntBASIC19.85■□□□□ 0.77
CDR1P51861 AC093458.2-201ENST00000623150 629 ntBASIC19.85■□□□□ 0.77
CDR1P51861 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.85■□□□□ 0.77
CDR1P51861 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR1P51861 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms