Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.78■□□□□ 0.12
HCFC1P51610 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
HCFC1P51610 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.78■□□□□ 0.12
HCFC1P51610 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.78■□□□□ 0.12
HCFC1P51610 AC009533.2-201ENST00000543664 586 ntBASIC15.78■□□□□ 0.12
HCFC1P51610 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 AL139424.1-201ENST00000607572 797 ntBASIC15.78■□□□□ 0.12
HCFC1P51610 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.78■□□□□ 0.12
HCFC1P51610 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.78■□□□□ 0.12
HCFC1P51610 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.78■□□□□ 0.12
HCFC1P51610 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HCFC1P51610 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.77■□□□□ 0.12
HCFC1P51610 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.77■□□□□ 0.12
HCFC1P51610 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.77■□□□□ 0.12
HCFC1P51610 RPSAP43-201ENST00000402237 625 ntBASIC15.77■□□□□ 0.12
HCFC1P51610 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.77■□□□□ 0.12
HCFC1P51610 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.77■□□□□ 0.12
HCFC1P51610 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
HCFC1P51610 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.77■□□□□ 0.12
HCFC1P51610 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
HCFC1P51610 FAM197Y3-203ENST00000618346 717 ntBASIC15.77■□□□□ 0.12
HCFC1P51610 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
HCFC1P51610 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC1P51610 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HCFC1P51610 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC1P51610 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HCFC1P51610 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.77■□□□□ 0.11
HCFC1P51610 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
HCFC1P51610 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC1P51610 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC1P51610 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC1P51610 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC1P51610 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.77■□□□□ 0.11
HCFC1P51610 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.77■□□□□ 0.11
HCFC1P51610 FAM220CP-201ENST00000395253 831 ntBASIC15.77■□□□□ 0.11
HCFC1P51610 AL591424.1-201ENST00000442569 1213 ntBASIC15.77■□□□□ 0.11
HCFC1P51610 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.77■□□□□ 0.11
HCFC1P51610 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.77■□□□□ 0.11
HCFC1P51610 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.77■□□□□ 0.11
HCFC1P51610 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.77■□□□□ 0.11
HCFC1P51610 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC1P51610 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HCFC1P51610 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HCFC1P51610 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 PMS2P2-201ENST00000425039 1128 ntBASIC15.76■□□□□ 0.11
HCFC1P51610 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.76■□□□□ 0.11
HCFC1P51610 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.76■□□□□ 0.11
HCFC1P51610 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.76■□□□□ 0.11
HCFC1P51610 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.76■□□□□ 0.11
HCFC1P51610 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.76■□□□□ 0.11
HCFC1P51610 Z83851.2-201ENST00000609564 659 ntBASIC15.76■□□□□ 0.11
HCFC1P51610 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.76■□□□□ 0.11
HCFC1P51610 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 SDHAP2-201ENST00000455183 2001 ntBASIC15.76■□□□□ 0.11
HCFC1P51610 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC1P51610 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC1P51610 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms