Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.78■□□□□ 0.28
HTR3AP46098 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.78■□□□□ 0.28
HTR3AP46098 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.78■□□□□ 0.28
HTR3AP46098 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.78■□□□□ 0.28
HTR3AP46098 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.78■□□□□ 0.28
HTR3AP46098 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HTR3AP46098 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.78■□□□□ 0.28
HTR3AP46098 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.78■□□□□ 0.28
HTR3AP46098 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.78■□□□□ 0.28
HTR3AP46098 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HTR3AP46098 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.78■□□□□ 0.28
HTR3AP46098 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.78■□□□□ 0.28
HTR3AP46098 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.77■□□□□ 0.28
HTR3AP46098 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.28
HTR3AP46098 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HTR3AP46098 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.77■□□□□ 0.28
HTR3AP46098 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.77■□□□□ 0.28
HTR3AP46098 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.77■□□□□ 0.28
HTR3AP46098 AC104390.1-201ENST00000555663 520 ntBASIC16.77■□□□□ 0.28
HTR3AP46098 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
HTR3AP46098 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HTR3AP46098 AC008764.6-201ENST00000595909 2069 ntBASIC16.77■□□□□ 0.27
HTR3AP46098 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HTR3AP46098 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HTR3AP46098 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.27
HTR3AP46098 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
HTR3AP46098 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HTR3AP46098 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.76■□□□□ 0.27
HTR3AP46098 LINC00896-202ENST00000609602 2128 ntBASIC16.76■□□□□ 0.27
HTR3AP46098 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HTR3AP46098 AL163051.1-201ENST00000569214 1512 ntBASIC16.76■□□□□ 0.27
HTR3AP46098 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.76■□□□□ 0.27
HTR3AP46098 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
HTR3AP46098 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 ECEL1P3-201ENST00000427961 737 ntBASIC16.76■□□□□ 0.27
HTR3AP46098 LIN28AP1-201ENST00000429574 405 ntBASIC16.76■□□□□ 0.27
HTR3AP46098 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HTR3AP46098 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HTR3AP46098 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HTR3AP46098 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.76■□□□□ 0.27
HTR3AP46098 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms