Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -01e-6■■■□□ 15.7
MATR3P43243 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.051e-6■■■□□ 15.7
MATR3P43243 TMEM123-205ENST00000528969 568 ntAPPRIS ALT2 TSL 43.28□□□□□ -1.881e-6■■■□□ 15.7
MATR3P43243 TMEM123-206ENST00000529492 549 ntTSL 22.63□□□□□ -1.991e-6■■■□□ 15.7
MATR3P43243 TMEM123-203ENST00000525577 550 ntTSL 42.45□□□□□ -2.021e-6■■■□□ 15.7
MATR3P43243 TMEM123-207ENST00000531103 568 ntTSL 42.25□□□□□ -2.051e-6■■■□□ 15.7
MATR3P43243 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.73■□□□□ 0.433e-7■■■□□ 15.7
MATR3P43243 AC007388.1-208ENST00000438649 1901 ntTSL 2 BASIC12.69□□□□□ -0.383e-7■■■□□ 15.7
MATR3P43243 AC007388.1-209ENST00000425775 527 ntTSL 48.5□□□□□ -1.053e-7■■■□□ 15.7
MATR3P43243 AC007388.1-211ENST00000451547 329 ntTSL 52.39□□□□□ -2.033e-7■■■□□ 15.7
MATR3P43243 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC13.51□□□□□ -0.256e-8■■■□□ 15.7
MATR3P43243 SEPT9-242ENST00000592098 503 ntTSL 414.6□□□□□ -0.072e-6■■■□□ 15.7
MATR3P43243 UBE2Z-205ENST00000508468 573 ntTSL 323.49■■□□□ 1.353e-8■■■□□ 15.7
MATR3P43243 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.48■■□□□ 1.353e-8■■■□□ 15.7
MATR3P43243 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.083e-8■■■□□ 15.7
MATR3P43243 FNDC3B-207ENST00000469491 2916 ntTSL 218.48■□□□□ 0.553e-8■■■□□ 15.7
MATR3P43243 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.323e-8■■■□□ 15.7
MATR3P43243 UBE2Z-204ENST00000506498 766 ntTSL 412.17□□□□□ -0.463e-8■■■□□ 15.7
MATR3P43243 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.73e-8■■■□□ 15.7
MATR3P43243 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.873e-8■■■□□ 15.7
MATR3P43243 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.55□□□□□ -1.043e-8■■■□□ 15.7
MATR3P43243 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.09□□□□□ -1.753e-8■■■□□ 15.7
MATR3P43243 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.9□□□□□ -1.783e-8■■■□□ 15.7
MATR3P43243 ENTPD1-AS1-204ENST00000427846 749 ntTSL 211.37□□□□□ -0.592e-6■■■□□ 15.7
MATR3P43243 ENTPD1-AS1-209ENST00000452728 858 ntTSL 3 BASIC11.09□□□□□ -0.632e-6■■■□□ 15.7
MATR3P43243 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC9.62□□□□□ -0.872e-6■■■□□ 15.7
MATR3P43243 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.15□□□□□ -1.272e-6■■■□□ 15.7
MATR3P43243 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.84□□□□□ -1.312e-6■■■□□ 15.7
MATR3P43243 ENTPD1-AS1-208ENST00000451364 716 ntTSL 26.36□□□□□ -1.392e-6■■■□□ 15.7
MATR3P43243 PEX13-205ENST00000472678 601 ntTSL 214.49□□□□□ -0.098e-7■■■□□ 15.6
MATR3P43243 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.148e-7■■■□□ 15.6
MATR3P43243 MED15-213ENST00000438962 573 ntTSL 413.78□□□□□ -0.22e-6■■■□□ 15.6
MATR3P43243 PTK2-256ENST00000524257 430 ntTSL 411.66□□□□□ -0.549e-7■■■□□ 15.6
MATR3P43243 PTK2-249ENST00000523679 504 ntTSL 38.13□□□□□ -1.119e-7■■■□□ 15.6
MATR3P43243 PRRC2B-201ENST00000320547 4950 ntTSL 214.06□□□□□ -0.161e-7■■■□□ 15.6
MATR3P43243 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.59■■□□□ 1.856e-7■■■□□ 15.6
MATR3P43243 QKI-204ENST00000361758 6085 ntTSL 526.57■■□□□ 1.846e-7■■■□□ 15.6
MATR3P43243 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.83■■□□□ 1.416e-7■■■□□ 15.6
MATR3P43243 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.43■■□□□ 1.186e-7■■■□□ 15.6
MATR3P43243 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.086e-7■■■□□ 15.6
MATR3P43243 QKI-208ENST00000537041 583 ntTSL 510.41□□□□□ -0.746e-7■■■□□ 15.6
MATR3P43243 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.08□□□□□ -1.286e-7■■■□□ 15.6
MATR3P43243 QKI-217ENST00000545607 846 ntTSL 55.26□□□□□ -1.576e-7■■■□□ 15.6
MATR3P43243 QKI-214ENST00000544436 495 ntTSL 35.19□□□□□ -1.582e-8■■■□□ 15.6
MATR3P43243 QKI-216ENST00000545346 457 ntTSL 53.99□□□□□ -1.772e-8■■■□□ 15.6
MATR3P43243 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.7□□□□□ -1.826e-7■■■□□ 15.6
MATR3P43243 MAP4K4-213ENST00000476609 3598 ntTSL 210.89□□□□□ -0.671e-6■■■□□ 15.6
MATR3P43243 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.772e-6■■■□□ 15.6
MATR3P43243 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.272e-6■■■□□ 15.6
MATR3P43243 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.75■□□□□ 0.272e-6■■■□□ 15.6
MATR3P43243 WDR82-203ENST00000469000 587 ntTSL 517.75■□□□□ 0.433e-7■■■□□ 15.6
MATR3P43243 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.84■□□□□ 0.136e-8■■■□□ 15.6
MATR3P43243 WDR82-202ENST00000463624 574 ntTSL 414.77□□□□□ -0.053e-7■■■□□ 15.6
MATR3P43243 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.233e-7■■■□□ 15.6
MATR3P43243 TEAD1-202ENST00000525312 1134 ntTSL 1 (best)13.33□□□□□ -0.289e-7■■■□□ 15.6
MATR3P43243 ZNF761-204ENST00000610928 938 ntTSL 1 (best) BASIC11.72□□□□□ -0.536e-8■■■□□ 15.6
MATR3P43243 WDR82-204ENST00000487402 4333 ntTSL 211.65□□□□□ -0.543e-7■■■□□ 15.6
MATR3P43243 AC098617.1-201ENST00000424116 500 ntTSL 214.42□□□□□ -0.12e-6■■■□□ 15.6
MATR3P43243 EPB41L2-225ENST00000530707 565 ntTSL 413.88□□□□□ -0.191e-6■■■□□ 15.5
MATR3P43243 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.188e-7■■■□□ 15.5
MATR3P43243 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.31□□□□□ -1.566e-7■■■□□ 15.5
MATR3P43243 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.96e-7■■■□□ 15.5
MATR3P43243 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.19□□□□□ -1.96e-7■■■□□ 15.5
MATR3P43243 TCERG1-202ENST00000394421 3633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.312e-6■■■□□ 15.5
MATR3P43243 TCERG1-201ENST00000296702 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.442e-6■■■□□ 15.5
MATR3P43243 TCERG1-216ENST00000549332 3518 ntTSL 511.98□□□□□ -0.492e-6■■■□□ 15.5
MATR3P43243 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC9.85□□□□□ -0.833e-6■■■□□ 15.5
MATR3P43243 SEPT9-229ENST00000590576 583 ntTSL 322.23■■□□□ 1.151e-6■■■□□ 15.5
MATR3P43243 SEPT9-222ENST00000589070 582 ntTSL 320.19■□□□□ 0.821e-6■■■□□ 15.5
MATR3P43243 SEPT9-217ENST00000587237 548 ntTSL 515.68■□□□□ 0.11e-6■■■□□ 15.5
MATR3P43243 SEPT9-240ENST00000591833 576 ntTSL 415.54■□□□□ 0.081e-6■■■□□ 15.5
MATR3P43243 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.1■■■□□ 2.413e-7■■■□□ 15.5
MATR3P43243 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.363e-7■■■□□ 15.5
MATR3P43243 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.943e-7■■■□□ 15.5
MATR3P43243 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.49■□□□□ 0.393e-7■■■□□ 15.5
MATR3P43243 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)16.66■□□□□ 0.263e-7■■■□□ 15.5
MATR3P43243 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)15.73■□□□□ 0.113e-7■■■□□ 15.5
MATR3P43243 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.08■□□□□ 0.013e-7■■■□□ 15.5
MATR3P43243 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)14.64□□□□□ -0.073e-7■■■□□ 15.5
MATR3P43243 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.738e-7■■■□□ 15.5
MATR3P43243 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.558e-7■■■□□ 15.5
MATR3P43243 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.95■□□□□ 0.468e-7■■■□□ 15.5
MATR3P43243 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.378e-7■■■□□ 15.5
MATR3P43243 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.032e-6■■■□□ 15.5
MATR3P43243 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.682e-6■■■□□ 15.5
MATR3P43243 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.85■□□□□ 0.936e-7■■■□□ 15.5
MATR3P43243 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)19.84■□□□□ 0.776e-7■■■□□ 15.5
MATR3P43243 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.586e-7■■■□□ 15.5
MATR3P43243 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.09■□□□□ 0.016e-7■■■□□ 15.5
MATR3P43243 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.76e-7■■■□□ 15.5
MATR3P43243 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.44□□□□□ -1.066e-7■■■□□ 15.5
MATR3P43243 LUC7L2-207ENST00000498518 2837 ntTSL 24.21□□□□□ -1.746e-7■■■□□ 15.5
MATR3P43243 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.694e-19■■■□□ 15.5
MATR3P43243 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.124e-19■■■□□ 15.5
MATR3P43243 PRRC2C-206ENST00000467601 717 ntTSL 210.31□□□□□ -0.762e-6■■■□□ 15.5
MATR3P43243 SETD5-209ENST00000431285 1824 ntTSL 526.23■■□□□ 1.792e-6■■■□□ 15.4
MATR3P43243 SETD5-214ENST00000463180 685 ntTSL 221.44■■□□□ 1.022e-6■■■□□ 15.4
MATR3P43243 SETD5-212ENST00000450326 921 ntTSL 317.01■□□□□ 0.312e-6■■■□□ 15.4
MATR3P43243 SETD5-207ENST00000415650 579 ntTSL 415.14■□□□□ 0.012e-6■■■□□ 15.4
MATR3P43243 SETD5-221ENST00000478475 477 ntTSL 48.22□□□□□ -1.092e-6■■■□□ 15.4
Retrieved 100 of 16,209 protein–RNA pairs in 88.9 ms