Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 AC010240.3-201ENST00000607688 395 ntBASIC16.72■□□□□ 0.27
SLC1A3P43003 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC1A3P43003 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A3P43003 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A3P43003 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC1A3P43003 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A3P43003 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 SLC25A3P1-201ENST00000443844 931 ntBASIC16.71■□□□□ 0.27
SLC1A3P43003 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 SEC1P-202ENST00000473944 940 ntBASIC16.71■□□□□ 0.27
SLC1A3P43003 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 AC024243.1-201ENST00000609234 778 ntBASIC16.71■□□□□ 0.27
SLC1A3P43003 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 AC133561.5-201ENST00000635547 218 ntBASIC16.71■□□□□ 0.27
SLC1A3P43003 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 AC097493.4-201ENST00000641197 219 ntBASIC16.71■□□□□ 0.27
SLC1A3P43003 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A3P43003 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A3P43003 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A3P43003 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC1A3P43003 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SLC1A3P43003 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC1A3P43003 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A3P43003 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A3P43003 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A3P43003 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A3P43003 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.7■□□□□ 0.26
SLC1A3P43003 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC1A3P43003 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC1A3P43003 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A3P43003 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A3P43003 AC012306.2-201ENST00000609350 630 ntBASIC16.7■□□□□ 0.26
SLC1A3P43003 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 AL138966.2-201ENST00000621997 464 ntBASIC16.7■□□□□ 0.26
SLC1A3P43003 AC141257.4-201ENST00000634557 245 ntBASIC16.7■□□□□ 0.26
SLC1A3P43003 AC136944.6-201ENST00000634818 245 ntBASIC16.7■□□□□ 0.26
SLC1A3P43003 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SLC1A3P43003 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A3P43003 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A3P43003 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC1A3P43003 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SLC1A3P43003 AC099343.3-201ENST00000605834 2503 ntBASIC16.69■□□□□ 0.26
SLC1A3P43003 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SLC1A3P43003 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A3P43003 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A3P43003 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A3P43003 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms