Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 ESPNP-201ENST00000270691 2015 ntBASIC18.4■□□□□ 0.54
HADHAP40939 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HADHAP40939 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.4■□□□□ 0.54
HADHAP40939 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.4■□□□□ 0.54
HADHAP40939 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.39■□□□□ 0.54
HADHAP40939 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.39■□□□□ 0.54
HADHAP40939 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HADHAP40939 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HADHAP40939 GNAS-203ENST00000306120 1878 ntBASIC18.39■□□□□ 0.54
HADHAP40939 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HADHAP40939 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
HADHAP40939 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HADHAP40939 GMCL1P1-201ENST00000463439 1581 ntBASIC18.39■□□□□ 0.53
HADHAP40939 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.39■□□□□ 0.53
HADHAP40939 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.39■□□□□ 0.53
HADHAP40939 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.39■□□□□ 0.53
HADHAP40939 BX664615.1-201ENST00000443558 458 ntBASIC18.39■□□□□ 0.53
HADHAP40939 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HADHAP40939 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HADHAP40939 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.39■□□□□ 0.53
HADHAP40939 COX11P1-201ENST00000489116 835 ntBASIC18.39■□□□□ 0.53
HADHAP40939 KRT18P21-201ENST00000515767 1272 ntBASIC18.39■□□□□ 0.53
HADHAP40939 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HADHAP40939 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.39■□□□□ 0.53
HADHAP40939 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HADHAP40939 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 AC140113.3-201ENST00000605663 199 ntBASIC18.39■□□□□ 0.53
HADHAP40939 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.39■□□□□ 0.53
HADHAP40939 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HADHAP40939 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
HADHAP40939 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HADHAP40939 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HADHAP40939 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.38■□□□□ 0.53
HADHAP40939 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
HADHAP40939 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.38■□□□□ 0.53
HADHAP40939 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
HADHAP40939 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.38■□□□□ 0.53
HADHAP40939 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.38■□□□□ 0.53
HADHAP40939 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HADHAP40939 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HADHAP40939 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HADHAP40939 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HADHAP40939 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.37■□□□□ 0.53
HADHAP40939 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.37■□□□□ 0.53
HADHAP40939 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.37■□□□□ 0.53
HADHAP40939 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
HADHAP40939 SDHAP2-201ENST00000455183 2001 ntBASIC18.37■□□□□ 0.53
HADHAP40939 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.37■□□□□ 0.53
HADHAP40939 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.37■□□□□ 0.53
HADHAP40939 AC005521.1-201ENST00000393351 872 ntBASIC18.37■□□□□ 0.53
HADHAP40939 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.37■□□□□ 0.53
HADHAP40939 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 AC034232.1-201ENST00000506026 1064 ntBASIC18.37■□□□□ 0.53
HADHAP40939 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 MIR3917-201ENST00000580971 93 ntBASIC18.37■□□□□ 0.53
HADHAP40939 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 AC073508.3-201ENST00000619697 1419 ntBASIC18.37■□□□□ 0.53
HADHAP40939 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.37■□□□□ 0.53
HADHAP40939 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HADHAP40939 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.37■□□□□ 0.53
HADHAP40939 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms