Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP8P40818 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
USP8P40818 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.78■□□□□ 0.76
USP8P40818 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.78■□□□□ 0.76
USP8P40818 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP8P40818 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.78■□□□□ 0.76
USP8P40818 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
USP8P40818 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP8P40818 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP8P40818 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.78■□□□□ 0.76
USP8P40818 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
USP8P40818 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
USP8P40818 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.77■□□□□ 0.76
USP8P40818 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.77■□□□□ 0.76
USP8P40818 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.77■□□□□ 0.76
USP8P40818 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
USP8P40818 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.77■□□□□ 0.76
USP8P40818 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
USP8P40818 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.77■□□□□ 0.76
USP8P40818 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.77■□□□□ 0.76
USP8P40818 FAM87A-204ENST00000613235 858 ntBASIC19.77■□□□□ 0.76
USP8P40818 AC112497.1-201ENST00000624824 639 ntBASIC19.77■□□□□ 0.76
USP8P40818 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.77■□□□□ 0.76
USP8P40818 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP8P40818 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.77■□□□□ 0.76
USP8P40818 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP8P40818 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
USP8P40818 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.77■□□□□ 0.75
USP8P40818 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP8P40818 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.77■□□□□ 0.75
USP8P40818 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP8P40818 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
USP8P40818 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.77■□□□□ 0.75
USP8P40818 AL163051.1-201ENST00000569214 1512 ntBASIC19.76■□□□□ 0.75
USP8P40818 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.76■□□□□ 0.75
USP8P40818 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 AL162741.1-201ENST00000565563 1558 ntBASIC19.76■□□□□ 0.75
USP8P40818 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 AC087499.1-201ENST00000418141 1075 ntBASIC19.76■□□□□ 0.75
USP8P40818 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USP8P40818 AC009947.2-201ENST00000444014 672 ntBASIC19.76■□□□□ 0.75
USP8P40818 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
USP8P40818 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
USP8P40818 HOXB1-202ENST00000577092 1414 ntBASIC19.76■□□□□ 0.75
USP8P40818 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms