Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL023875.1-201ENST00000640777 796 ntBASIC20.69■□□□□ 0.9
CLCN1P35523 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLCN1P35523 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLCN1P35523 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLCN1P35523 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLCN1P35523 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 CROCCP2-202ENST00000412962 2773 ntBASIC20.68■□□□□ 0.9
CLCN1P35523 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCN1P35523 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.68■□□□□ 0.9
CLCN1P35523 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 PCDHA14-201ENST00000506751 2298 ntBASIC20.68■□□□□ 0.9
CLCN1P35523 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN1P35523 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN1P35523 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLCN1P35523 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.68■□□□□ 0.9
CLCN1P35523 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 AC073648.6-201ENST00000641589 218 ntBASIC20.67■□□□□ 0.9
CLCN1P35523 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN1P35523 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN1P35523 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLCN1P35523 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CLCN1P35523 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.66■□□□□ 0.9
CLCN1P35523 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 RN7SL471P-201ENST00000580476 299 ntBASIC20.66■□□□□ 0.9
CLCN1P35523 AC006058.3-201ENST00000606217 1069 ntBASIC20.66■□□□□ 0.9
CLCN1P35523 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLCN1P35523 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLCN1P35523 AGGF1P2-201ENST00000426656 2106 ntBASIC20.66■□□□□ 0.9
CLCN1P35523 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms