Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHMLP26374 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHMLP26374 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
CHMLP26374 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMLP26374 HLA-F-220ENST00000434407 884 ntBASIC21.9■■□□□ 1.1
CHMLP26374 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.9■■□□□ 1.1
CHMLP26374 AC092597.1-201ENST00000487352 616 ntBASIC21.9■■□□□ 1.1
CHMLP26374 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.9■■□□□ 1.1
CHMLP26374 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMLP26374 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHMLP26374 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CHMLP26374 AL136038.4-201ENST00000603606 1261 ntBASIC21.9■■□□□ 1.1
CHMLP26374 LINC01023-201ENST00000606054 436 ntBASIC21.9■■□□□ 1.1
CHMLP26374 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 LINC00602-201ENST00000629776 2065 ntBASIC21.9■■□□□ 1.1
CHMLP26374 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 AC100803.2-201ENST00000562459 1963 ntBASIC21.9■■□□□ 1.1
CHMLP26374 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMLP26374 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHMLP26374 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.9■■□□□ 1.1
CHMLP26374 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHMLP26374 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CHMLP26374 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
CHMLP26374 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.89■■□□□ 1.1
CHMLP26374 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHMLP26374 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMLP26374 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CHMLP26374 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
CHMLP26374 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.89■■□□□ 1.09
CHMLP26374 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 KRT18P38-201ENST00000449496 1282 ntBASIC21.89■■□□□ 1.09
CHMLP26374 AC113404.2-201ENST00000507884 177 ntBASIC21.89■■□□□ 1.09
CHMLP26374 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.89■■□□□ 1.09
CHMLP26374 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.89■■□□□ 1.09
CHMLP26374 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.89■■□□□ 1.09
CHMLP26374 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
CHMLP26374 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMLP26374 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.89■■□□□ 1.09
CHMLP26374 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMLP26374 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 LINC00896-202ENST00000609602 2128 ntBASIC21.88■■□□□ 1.09
CHMLP26374 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
CHMLP26374 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CHMLP26374 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.88■■□□□ 1.09
CHMLP26374 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.88■■□□□ 1.09
CHMLP26374 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMLP26374 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMLP26374 AC008687.5-201ENST00000593746 558 ntBASIC21.88■■□□□ 1.09
CHMLP26374 AC024563.2-201ENST00000603282 481 ntBASIC21.88■■□□□ 1.09
CHMLP26374 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMLP26374 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CHMLP26374 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMLP26374 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMLP26374 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CHMLP26374 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMLP26374 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CHMLP26374 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CHMLP26374 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMLP26374 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMLP26374 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.87■■□□□ 1.09
CHMLP26374 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CHMLP26374 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 KRT89P-201ENST00000620027 1478 ntBASIC21.87■■□□□ 1.09
CHMLP26374 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMLP26374 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CHMLP26374 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms