Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIR662-201ENST00000384847 95 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC2P18074 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 KRT18P48-201ENST00000434763 852 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 SPDYE13P-201ENST00000445314 798 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC2P18074 AL671277.2-201ENST00000458060 996 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 AC113404.2-201ENST00000507884 177 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
ERCC2P18074 AC083849.1-201ENST00000615227 514 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC2P18074 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC2P18074 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC2P18074 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC2P18074 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC2P18074 AP000997.3-201ENST00000623333 2250 ntBASIC18.69■□□□□ 0.58
ERCC2P18074 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ERCC2P18074 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC2P18074 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ERCC2P18074 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ERCC2P18074 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC2P18074 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC2P18074 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.68■□□□□ 0.58
ERCC2P18074 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ERCC2P18074 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC2P18074 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ERCC2P18074 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 FLJ13224-201ENST00000313737 1514 ntBASIC18.68■□□□□ 0.58
ERCC2P18074 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC2P18074 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
ERCC2P18074 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC2P18074 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC2P18074 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC2P18074 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC2P18074 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.67■□□□□ 0.58
ERCC2P18074 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 LINC00602-201ENST00000629776 2065 ntBASIC18.67■□□□□ 0.58
ERCC2P18074 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ERCC2P18074 LINC00167-201ENST00000530583 1419 ntBASIC18.67■□□□□ 0.58
ERCC2P18074 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ERCC2P18074 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.67■□□□□ 0.58
ERCC2P18074 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.67■□□□□ 0.58
ERCC2P18074 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC2P18074 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.67■□□□□ 0.58
ERCC2P18074 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.67■□□□□ 0.58
ERCC2P18074 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.67■□□□□ 0.58
ERCC2P18074 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
ERCC2P18074 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC2P18074 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC2P18074 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC2P18074 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.66■□□□□ 0.58
ERCC2P18074 ZNF444P1-201ENST00000559497 298 ntBASIC18.66■□□□□ 0.58
ERCC2P18074 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 NTF6B-201ENST00000591913 560 ntBASIC18.66■□□□□ 0.58
ERCC2P18074 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms