Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPN1P18031 AC093010.1-201ENST00000473625 1624 ntBASIC19.19■□□□□ 0.66
PTPN1P18031 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN1P18031 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPN1P18031 KRT18P65-201ENST00000439811 1286 ntBASIC19.19■□□□□ 0.66
PTPN1P18031 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPN1P18031 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.19■□□□□ 0.66
PTPN1P18031 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN1P18031 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN1P18031 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPN1P18031 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN1P18031 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN1P18031 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN1P18031 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN1P18031 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN1P18031 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 AL845331.1-201ENST00000424978 1190 ntBASIC19.18■□□□□ 0.66
PTPN1P18031 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN1P18031 AP000867.3-201ENST00000524675 377 ntBASIC19.18■□□□□ 0.66
PTPN1P18031 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 AC011840.4-201ENST00000578471 627 ntBASIC19.18■□□□□ 0.66
PTPN1P18031 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN1P18031 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN1P18031 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.18■□□□□ 0.66
PTPN1P18031 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTPN1P18031 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN1P18031 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN1P18031 AC233702.3-201ENST00000578656 1387 ntBASIC19.18■□□□□ 0.66
PTPN1P18031 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 AC026471.1-201ENST00000564629 3026 ntBASIC19.17■□□□□ 0.66
PTPN1P18031 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN1P18031 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PTPN1P18031 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN1P18031 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN1P18031 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN1P18031 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN1P18031 MIR3652-201ENST00000579335 131 ntBASIC19.17■□□□□ 0.66
PTPN1P18031 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 CLEC4GP1-201ENST00000596555 870 ntBASIC19.17■□□□□ 0.66
PTPN1P18031 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PTPN1P18031 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN1P18031 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 AL096828.2-201ENST00000567259 1965 ntBASIC19.17■□□□□ 0.66
PTPN1P18031 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN1P18031 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN1P18031 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPN1P18031 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PTPN1P18031 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN1P18031 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPN1P18031 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN1P18031 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms