Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PDGFRAP16234 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFRAP16234 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.06■□□□□ 0.64
PDGFRAP16234 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 AC112907.2-201ENST00000448639 330 ntBASIC19.06■□□□□ 0.64
PDGFRAP16234 AL671277.2-201ENST00000458060 996 ntBASIC19.06■□□□□ 0.64
PDGFRAP16234 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFRAP16234 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFRAP16234 AL136038.4-201ENST00000603606 1261 ntBASIC19.06■□□□□ 0.64
PDGFRAP16234 AC093010.1-201ENST00000473625 1624 ntBASIC19.06■□□□□ 0.64
PDGFRAP16234 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFRAP16234 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFRAP16234 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.05■□□□□ 0.64
PDGFRAP16234 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
PDGFRAP16234 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 AC138028.4-201ENST00000564984 1845 ntBASIC19.05■□□□□ 0.64
PDGFRAP16234 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDGFRAP16234 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PDGFRAP16234 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 AC008687.5-201ENST00000593746 558 ntBASIC19.05■□□□□ 0.64
PDGFRAP16234 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.05■□□□□ 0.64
PDGFRAP16234 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PDGFRAP16234 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
PDGFRAP16234 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.05■□□□□ 0.64
PDGFRAP16234 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.05■□□□□ 0.64
PDGFRAP16234 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFRAP16234 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFRAP16234 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
PDGFRAP16234 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDGFRAP16234 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 AC092597.1-201ENST00000487352 616 ntBASIC19.04■□□□□ 0.64
PDGFRAP16234 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.04■□□□□ 0.64
PDGFRAP16234 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFRAP16234 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFRAP16234 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFRAP16234 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFRAP16234 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDGFRAP16234 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFRAP16234 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms