Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.53■□□□□ 0.88
COL11A1P12107 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COL11A1P12107 AC006538.3-201ENST00000612495 578 ntBASIC20.53■□□□□ 0.88
COL11A1P12107 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL11A1P12107 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.53■□□□□ 0.88
COL11A1P12107 AC007967.2-201ENST00000432613 625 ntBASIC20.53■□□□□ 0.88
COL11A1P12107 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL11A1P12107 RNA5SP415-201ENST00000517246 115 ntBASIC20.53■□□□□ 0.88
COL11A1P12107 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.53■□□□□ 0.88
COL11A1P12107 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.53■□□□□ 0.88
COL11A1P12107 AC073592.3-201ENST00000625118 1834 ntBASIC20.52■□□□□ 0.88
COL11A1P12107 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.52■□□□□ 0.88
COL11A1P12107 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.52■□□□□ 0.88
COL11A1P12107 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
COL11A1P12107 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.52■□□□□ 0.88
COL11A1P12107 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.52■□□□□ 0.88
COL11A1P12107 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.52■□□□□ 0.88
COL11A1P12107 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL11A1P12107 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL11A1P12107 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL11A1P12107 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.52■□□□□ 0.87
COL11A1P12107 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.51■□□□□ 0.87
COL11A1P12107 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.51■□□□□ 0.87
COL11A1P12107 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL11A1P12107 KRT18P13-201ENST00000400056 1290 ntBASIC20.51■□□□□ 0.87
COL11A1P12107 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.51■□□□□ 0.87
COL11A1P12107 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.51■□□□□ 0.87
COL11A1P12107 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.51■□□□□ 0.87
COL11A1P12107 NKAPP1-205ENST00000585790 367 ntBASIC20.51■□□□□ 0.87
COL11A1P12107 AC117500.6-201ENST00000624871 588 ntBASIC20.51■□□□□ 0.87
COL11A1P12107 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL11A1P12107 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.51■□□□□ 0.87
COL11A1P12107 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL11A1P12107 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COL11A1P12107 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.5■□□□□ 0.87
COL11A1P12107 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
COL11A1P12107 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.5■□□□□ 0.87
COL11A1P12107 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.5■□□□□ 0.87
COL11A1P12107 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.5■□□□□ 0.87
COL11A1P12107 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.5■□□□□ 0.87
COL11A1P12107 Z83851.2-201ENST00000609564 659 ntBASIC20.5■□□□□ 0.87
COL11A1P12107 AC139530.3-201ENST00000620344 690 ntBASIC20.5■□□□□ 0.87
COL11A1P12107 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.5■□□□□ 0.87
COL11A1P12107 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 SIGLEC16-201ENST00000599858 1437 ntBASIC20.5■□□□□ 0.87
COL11A1P12107 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL11A1P12107 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.5■□□□□ 0.87
COL11A1P12107 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.5■□□□□ 0.87
COL11A1P12107 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.5■□□□□ 0.87
COL11A1P12107 AC093909.1-201ENST00000504731 1122 ntBASIC20.5■□□□□ 0.87
COL11A1P12107 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 AP002414.3-201ENST00000589352 1468 ntBASIC20.5■□□□□ 0.87
COL11A1P12107 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
COL11A1P12107 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL11A1P12107 PMPCAP1-201ENST00000508114 1576 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms