Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MMP2P08253 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP2P08253 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP2P08253 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MMP2P08253 AC018470.1-201ENST00000624790 3129 ntBASIC18.27■□□□□ 0.52
MMP2P08253 NOC2LP2-201ENST00000407594 1944 ntBASIC18.27■□□□□ 0.52
MMP2P08253 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
MMP2P08253 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP2P08253 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP2P08253 Z83836.1-201ENST00000624605 1642 ntBASIC18.27■□□□□ 0.52
MMP2P08253 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MMP2P08253 AC005332.1-201ENST00000577698 1310 ntBASIC18.27■□□□□ 0.52
MMP2P08253 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP2P08253 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.27■□□□□ 0.52
MMP2P08253 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP2P08253 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP2P08253 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
MMP2P08253 AL445228.2-201ENST00000605589 952 ntBASIC18.27■□□□□ 0.52
MMP2P08253 AC010331.1-201ENST00000611423 582 ntBASIC18.27■□□□□ 0.52
MMP2P08253 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP2P08253 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
MMP2P08253 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.27■□□□□ 0.52
MMP2P08253 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP2P08253 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP2P08253 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MMP2P08253 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
MMP2P08253 AL353692.3-201ENST00000407031 1396 ntBASIC18.27■□□□□ 0.51
MMP2P08253 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP2P08253 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP2P08253 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP2P08253 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MMP2P08253 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
MMP2P08253 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.26■□□□□ 0.51
MMP2P08253 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.26■□□□□ 0.51
MMP2P08253 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 AL133373.2-201ENST00000623187 2828 ntBASIC18.26■□□□□ 0.51
MMP2P08253 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 MIR1224-201ENST00000408193 85 ntBASIC18.26■□□□□ 0.51
MMP2P08253 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.26■□□□□ 0.51
MMP2P08253 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
MMP2P08253 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MMP2P08253 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.26■□□□□ 0.51
MMP2P08253 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP2P08253 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MMP2P08253 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MMP2P08253 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MMP2P08253 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MMP2P08253 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 AC100803.2-201ENST00000562459 1963 ntBASIC18.25■□□□□ 0.51
MMP2P08253 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 AC087388.1-201ENST00000571370 1112 ntBASIC18.25■□□□□ 0.51
MMP2P08253 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP2P08253 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP2P08253 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP2P08253 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MMP2P08253 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms