Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND1P03886 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND1P03886 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND1P03886 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-ND1P03886 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND1P03886 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND1P03886 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND1P03886 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND1P03886 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 AC006116.8-202ENST00000587620 1550 ntBASIC17.15■□□□□ 0.34
MT-ND1P03886 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND1P03886 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 KSR1P1-201ENST00000446298 240 ntBASIC17.15■□□□□ 0.34
MT-ND1P03886 AC128676.1-201ENST00000454392 318 ntBASIC17.15■□□□□ 0.34
MT-ND1P03886 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND1P03886 AP002982.1-201ENST00000492365 877 ntBASIC17.15■□□□□ 0.34
MT-ND1P03886 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND1P03886 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND1P03886 CD99P1-205ENST00000527459 561 ntBASIC17.15■□□□□ 0.34
MT-ND1P03886 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.15■□□□□ 0.34
MT-ND1P03886 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND1P03886 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND1P03886 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND1P03886 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
MT-ND1P03886 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
MT-ND1P03886 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
MT-ND1P03886 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MT-ND1P03886 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 AL353807.1-201ENST00000427475 662 ntBASIC17.14■□□□□ 0.33
MT-ND1P03886 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.14■□□□□ 0.33
MT-ND1P03886 C1QBPP2-201ENST00000528754 825 ntBASIC17.14■□□□□ 0.33
MT-ND1P03886 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.14■□□□□ 0.33
MT-ND1P03886 AC011676.5-201ENST00000624864 2660 ntBASIC17.14■□□□□ 0.33
MT-ND1P03886 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
MT-ND1P03886 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 GMCL1P1-201ENST00000463439 1581 ntBASIC17.14■□□□□ 0.33
MT-ND1P03886 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND1P03886 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.14■□□□□ 0.33
MT-ND1P03886 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.14■□□□□ 0.33
MT-ND1P03886 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND1P03886 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND1P03886 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND1P03886 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms