Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
MBD3O95983 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MBD3O95983 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.83■□□□□ 0.93
MBD3O95983 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.83■□□□□ 0.93
MBD3O95983 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.83■□□□□ 0.93
MBD3O95983 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.83■□□□□ 0.93
MBD3O95983 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MBD3O95983 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3O95983 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.83■□□□□ 0.93
MBD3O95983 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
MBD3O95983 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.83■□□□□ 0.93
MBD3O95983 AC069544.1-201ENST00000609399 999 ntBASIC20.83■□□□□ 0.93
MBD3O95983 AC011298.2-201ENST00000617989 482 ntBASIC20.83■□□□□ 0.93
MBD3O95983 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MBD3O95983 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.83■□□□□ 0.92
MBD3O95983 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MBD3O95983 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.83■□□□□ 0.92
MBD3O95983 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.83■□□□□ 0.92
MBD3O95983 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MBD3O95983 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.83■□□□□ 0.92
MBD3O95983 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.83■□□□□ 0.92
MBD3O95983 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MBD3O95983 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MBD3O95983 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD3O95983 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MBD3O95983 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.82■□□□□ 0.92
MBD3O95983 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.82■□□□□ 0.92
MBD3O95983 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD3O95983 AC008403.3-201ENST00000598924 454 ntBASIC20.82■□□□□ 0.92
MBD3O95983 AC133041.1-202ENST00000642053 222 ntBASIC20.82■□□□□ 0.92
MBD3O95983 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 CROCCP2-202ENST00000412962 2773 ntBASIC20.82■□□□□ 0.92
MBD3O95983 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MBD3O95983 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3O95983 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.82■□□□□ 0.92
MBD3O95983 PKD1P1-201ENST00000458669 6805 ntBASIC20.81■□□□□ 0.92
MBD3O95983 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
MBD3O95983 AC099343.3-201ENST00000605834 2503 ntBASIC20.81■□□□□ 0.92
MBD3O95983 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD3O95983 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
MBD3O95983 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MBD3O95983 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 KRASP1-201ENST00000407852 552 ntBASIC20.81■□□□□ 0.92
MBD3O95983 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.81■□□□□ 0.92
MBD3O95983 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.81■□□□□ 0.92
MBD3O95983 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.81■□□□□ 0.92
MBD3O95983 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD3O95983 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms