Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNOT4O95628 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNOT4O95628 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CNOT4O95628 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.15■□□□□ 0.18
CNOT4O95628 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.15■□□□□ 0.18
CNOT4O95628 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.14■□□□□ 0.17
CNOT4O95628 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CNOT4O95628 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
CNOT4O95628 AC113404.2-201ENST00000507884 177 ntBASIC16.14■□□□□ 0.17
CNOT4O95628 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.14■□□□□ 0.17
CNOT4O95628 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.14■□□□□ 0.17
CNOT4O95628 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.14■□□□□ 0.17
CNOT4O95628 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CNOT4O95628 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 AC093503.3-201ENST00000624917 2352 ntBASIC16.14■□□□□ 0.17
CNOT4O95628 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CNOT4O95628 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT4O95628 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT4O95628 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 CROCCP3-202ENST00000420820 1947 ntBASIC16.13■□□□□ 0.17
CNOT4O95628 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.13■□□□□ 0.17
CNOT4O95628 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CNOT4O95628 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.13■□□□□ 0.17
CNOT4O95628 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.13■□□□□ 0.17
CNOT4O95628 AP003733.1-201ENST00000491725 852 ntBASIC16.13■□□□□ 0.17
CNOT4O95628 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.13■□□□□ 0.17
CNOT4O95628 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.13■□□□□ 0.17
CNOT4O95628 KRT8P26-201ENST00000534154 1276 ntBASIC16.13■□□□□ 0.17
CNOT4O95628 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.13■□□□□ 0.17
CNOT4O95628 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.13■□□□□ 0.17
CNOT4O95628 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.13■□□□□ 0.17
CNOT4O95628 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CNOT4O95628 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.13■□□□□ 0.17
CNOT4O95628 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.13■□□□□ 0.17
CNOT4O95628 AL121672.3-201ENST00000608644 468 ntBASIC16.13■□□□□ 0.17
CNOT4O95628 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CNOT4O95628 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNOT4O95628 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CNOT4O95628 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.13■□□□□ 0.17
CNOT4O95628 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CNOT4O95628 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CNOT4O95628 SDHAP2-201ENST00000455183 2001 ntBASIC16.12■□□□□ 0.17
CNOT4O95628 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CNOT4O95628 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.12■□□□□ 0.17
CNOT4O95628 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CNOT4O95628 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.12■□□□□ 0.17
CNOT4O95628 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms