Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF253O75346 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF253O75346 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ZNF253O75346 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF253O75346 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF253O75346 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF253O75346 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 KRASP1-201ENST00000407852 552 ntBASIC14.17□□□□□ -0.14
ZNF253O75346 AC004980.1-204ENST00000429707 299 ntBASIC14.17□□□□□ -0.14
ZNF253O75346 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF253O75346 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF253O75346 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF253O75346 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF253O75346 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF253O75346 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF253O75346 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF253O75346 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.17□□□□□ -0.14
ZNF253O75346 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF253O75346 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF253O75346 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF253O75346 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF253O75346 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 AC080080.1-201ENST00000625121 2420 ntBASIC14.16□□□□□ -0.14
ZNF253O75346 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF253O75346 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 AL357033.4-201ENST00000617703 1807 ntBASIC14.16□□□□□ -0.14
ZNF253O75346 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ZNF253O75346 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF253O75346 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
ZNF253O75346 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.16□□□□□ -0.14
ZNF253O75346 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 AC026271.3-201ENST00000571884 352 ntBASIC14.16□□□□□ -0.14
ZNF253O75346 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF253O75346 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF253O75346 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ZNF253O75346 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF253O75346 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF253O75346 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF253O75346 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF253O75346 AL356309.3-201ENST00000624132 1934 ntBASIC14.15□□□□□ -0.14
ZNF253O75346 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF253O75346 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF253O75346 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms