Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CDH16O75309 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 AC008040.2-201ENST00000461049 708 ntBASIC18.37■□□□□ 0.53
CDH16O75309 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH16O75309 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH16O75309 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.37■□□□□ 0.53
CDH16O75309 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CDH16O75309 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDH16O75309 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 KRT16P1-201ENST00000399124 1418 ntBASIC18.36■□□□□ 0.53
CDH16O75309 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 AC133681.1-201ENST00000465482 601 ntBASIC18.36■□□□□ 0.53
CDH16O75309 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 AC130371.2-201ENST00000619443 611 ntBASIC18.36■□□□□ 0.53
CDH16O75309 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 AL031985.4-201ENST00000642138 673 ntBASIC18.36■□□□□ 0.53
CDH16O75309 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH16O75309 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDH16O75309 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH16O75309 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 AL355312.1-201ENST00000407115 2176 ntBASIC18.35■□□□□ 0.53
CDH16O75309 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH16O75309 GPAT2P1-201ENST00000444924 1672 ntBASIC18.35■□□□□ 0.53
CDH16O75309 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 TSPY20P-201ENST00000450910 630 ntBASIC18.35■□□□□ 0.53
CDH16O75309 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH16O75309 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 AC124016.1-201ENST00000609552 612 ntBASIC18.35■□□□□ 0.53
CDH16O75309 AC110285.5-201ENST00000611501 352 ntBASIC18.35■□□□□ 0.53
CDH16O75309 ITM2C-210ENST00000620962 501 ntBASIC18.35■□□□□ 0.53
CDH16O75309 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDH16O75309 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH16O75309 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH16O75309 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDH16O75309 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH16O75309 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH16O75309 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH16O75309 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH16O75309 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDH16O75309 AL138688.1-201ENST00000624851 1594 ntBASIC18.34■□□□□ 0.53
CDH16O75309 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDH16O75309 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms