Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX4O60224 AC010203.1-204ENST00000548782 407 ntBASIC16.5■□□□□ 0.23
SSX4O60224 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.5■□□□□ 0.23
SSX4O60224 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.5■□□□□ 0.23
SSX4O60224 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SSX4O60224 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX4O60224 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SSX4O60224 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX4O60224 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.5■□□□□ 0.23
SSX4O60224 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX4O60224 NKILA-202ENST00000614771 2598 ntBASIC16.49■□□□□ 0.23
SSX4O60224 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.49■□□□□ 0.23
SSX4O60224 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.49■□□□□ 0.23
SSX4O60224 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX4O60224 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 AC128688.1-201ENST00000487626 519 ntBASIC16.49■□□□□ 0.23
SSX4O60224 EGLN1P1-201ENST00000531623 762 ntBASIC16.49■□□□□ 0.23
SSX4O60224 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 AP005242.2-201ENST00000580065 1175 ntBASIC16.49■□□□□ 0.23
SSX4O60224 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX4O60224 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSX4O60224 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX4O60224 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SSX4O60224 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
SSX4O60224 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSX4O60224 AL162741.1-201ENST00000565563 1558 ntBASIC16.48■□□□□ 0.23
SSX4O60224 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SSX4O60224 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 AC073508.3-201ENST00000619697 1419 ntBASIC16.48■□□□□ 0.23
SSX4O60224 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 DUX4L26-201ENST00000489078 1255 ntBASIC16.48■□□□□ 0.23
SSX4O60224 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SSX4O60224 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SSX4O60224 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX4O60224 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms