Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF13O43567 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF13O43567 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.56■□□□□ 0.24
RNF13O43567 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF13O43567 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RNF13O43567 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF13O43567 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF13O43567 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF13O43567 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF13O43567 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF13O43567 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF13O43567 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.55■□□□□ 0.24
RNF13O43567 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 KRT8P7-201ENST00000533003 1432 ntBASIC16.55■□□□□ 0.24
RNF13O43567 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 SLC25A6P5-201ENST00000435663 894 ntBASIC16.55■□□□□ 0.24
RNF13O43567 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 WWOX-216ENST00000569818 525 ntBASIC16.55■□□□□ 0.24
RNF13O43567 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 PRORSD1P-202ENST00000563365 2154 ntBASIC16.55■□□□□ 0.24
RNF13O43567 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF13O43567 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF13O43567 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF13O43567 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 CYP2D8P-201ENST00000433633 1490 ntBASIC16.54■□□□□ 0.24
RNF13O43567 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RNF13O43567 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF13O43567 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF13O43567 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF13O43567 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RNF13O43567 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 AC138028.4-201ENST00000564984 1845 ntBASIC16.54■□□□□ 0.24
RNF13O43567 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF13O43567 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF13O43567 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 KRT8P9-201ENST00000558927 1449 ntBASIC16.53■□□□□ 0.24
RNF13O43567 HOXB1-202ENST00000577092 1414 ntBASIC16.53■□□□□ 0.24
RNF13O43567 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF13O43567 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms