Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX4O14627 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX4O14627 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX4O14627 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDX4O14627 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.42■□□□□ 0.38
CDX4O14627 AL513190.1-201ENST00000621254 727 ntBASIC17.42■□□□□ 0.38
CDX4O14627 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX4O14627 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.42■□□□□ 0.38
CDX4O14627 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.42■□□□□ 0.38
CDX4O14627 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 AIRN-201ENST00000601203 4374 ntBASIC17.42■□□□□ 0.38
CDX4O14627 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.42■□□□□ 0.38
CDX4O14627 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDX4O14627 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.41■□□□□ 0.38
CDX4O14627 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 SIGLEC16-201ENST00000599858 1437 ntBASIC17.41■□□□□ 0.38
CDX4O14627 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CDX4O14627 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
CDX4O14627 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDX4O14627 SPCS2P1-201ENST00000561636 679 ntBASIC17.41■□□□□ 0.38
CDX4O14627 AC018845.2-201ENST00000568326 409 ntBASIC17.41■□□□□ 0.38
CDX4O14627 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 AL078644.1-201ENST00000609881 752 ntBASIC17.41■□□□□ 0.38
CDX4O14627 AD001527.2-201ENST00000622994 785 ntBASIC17.41■□□□□ 0.38
CDX4O14627 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CDX4O14627 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDX4O14627 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX4O14627 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX4O14627 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDX4O14627 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX4O14627 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.4■□□□□ 0.38
CDX4O14627 CEND1P1-201ENST00000451006 455 ntBASIC17.4■□□□□ 0.38
CDX4O14627 COX20P2-201ENST00000452636 358 ntBASIC17.4■□□□□ 0.38
CDX4O14627 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX4O14627 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CDX4O14627 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX4O14627 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDX4O14627 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.4■□□□□ 0.38
CDX4O14627 AC239800.4-201ENST00000603712 296 ntBASIC17.4■□□□□ 0.38
CDX4O14627 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX4O14627 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.4■□□□□ 0.38
CDX4O14627 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.39■□□□□ 0.38
CDX4O14627 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDX4O14627 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
CDX4O14627 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.39■□□□□ 0.37
CDX4O14627 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.39■□□□□ 0.37
CDX4O14627 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 AC244107.1-201ENST00000442033 332 ntBASIC17.39■□□□□ 0.37
CDX4O14627 VN2R19P-201ENST00000442399 1052 ntBASIC17.39■□□□□ 0.37
CDX4O14627 HCG4B-203ENST00000450128 991 ntBASIC17.39■□□□□ 0.37
CDX4O14627 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms