Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 AC009154.2-201ENST00000621177 724 ntBASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.91■□□□□ 0.62
YJEFN3A6XGL0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 AL845331.1-201ENST00000424978 1190 ntBASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 KRT18P65-201ENST00000439811 1286 ntBASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 AC068472.1-201ENST00000474589 881 ntBASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
YJEFN3A6XGL0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
YJEFN3A6XGL0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.89■□□□□ 0.62
YJEFN3A6XGL0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
YJEFN3A6XGL0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.89■□□□□ 0.62
YJEFN3A6XGL0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 DRAXINP1-201ENST00000437611 948 ntBASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 ABALON-201ENST00000629058 1903 ntBASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
YJEFN3A6XGL0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 HCG4P8-203ENST00000443049 980 ntBASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.88■□□□□ 0.61
YJEFN3A6XGL0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms