Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AC069148.1-201ENST00000608741 768 ntBASIC18.84■□□□□ 0.61
SRRM3A6NNA2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AL118508.1-201ENST00000613502 2345 ntBASIC18.84■□□□□ 0.61
SRRM3A6NNA2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
SRRM3A6NNA2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM3A6NNA2 AC124283.5-201ENST00000624661 1809 ntBASIC18.84■□□□□ 0.61
SRRM3A6NNA2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM3A6NNA2 AL121761.2-201ENST00000598007 1648 ntBASIC18.83■□□□□ 0.61
SRRM3A6NNA2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.83■□□□□ 0.6
SRRM3A6NNA2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 AC106820.2-201ENST00000563775 3264 ntBASIC18.83■□□□□ 0.6
SRRM3A6NNA2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM3A6NNA2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 HMGA1P5-201ENST00000412453 271 ntBASIC18.82■□□□□ 0.6
SRRM3A6NNA2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM3A6NNA2 AL138966.2-201ENST00000621997 464 ntBASIC18.82■□□□□ 0.6
SRRM3A6NNA2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms