Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCCD1A6NED2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
RCCD1A6NED2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.3■□□□□ 0.68
RCCD1A6NED2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 WWOX-216ENST00000569818 525 ntBASIC19.3■□□□□ 0.68
RCCD1A6NED2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RCCD1A6NED2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.3■□□□□ 0.68
RCCD1A6NED2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCCD1A6NED2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 KRT8P7-201ENST00000533003 1432 ntBASIC19.29■□□□□ 0.68
RCCD1A6NED2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 PRORSD1P-201ENST00000295112 541 ntBASIC19.29■□□□□ 0.68
RCCD1A6NED2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 RPS2P55-201ENST00000397318 883 ntBASIC19.29■□□□□ 0.68
RCCD1A6NED2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 AC107956.1-201ENST00000494359 873 ntBASIC19.29■□□□□ 0.68
RCCD1A6NED2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 CROCCP2-202ENST00000412962 2773 ntBASIC19.29■□□□□ 0.68
RCCD1A6NED2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.29■□□□□ 0.68
RCCD1A6NED2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCCD1A6NED2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 NKILA-202ENST00000614771 2598 ntBASIC19.28■□□□□ 0.68
RCCD1A6NED2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 AC104390.1-201ENST00000555663 520 ntBASIC19.28■□□□□ 0.68
RCCD1A6NED2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCCD1A6NED2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RCCD1A6NED2 AC011676.5-201ENST00000624864 2660 ntBASIC19.28■□□□□ 0.68
RCCD1A6NED2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms