Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 BX005266.1-201ENST00000473402 457 ntBASIC24.49■■□□□ 1.51
SBNO1A3KN83 CYMP-203ENST00000474680 1263 ntBASIC24.49■■□□□ 1.51
SBNO1A3KN83 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 AC108751.1-201ENST00000490852 363 ntBASIC24.49■■□□□ 1.51
SBNO1A3KN83 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 MIR1199-201ENST00000621445 119 ntBASIC24.49■■□□□ 1.51
SBNO1A3KN83 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.49■■□□□ 1.51
SBNO1A3KN83 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SBNO1A3KN83 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 AC007967.3-201ENST00000434308 558 ntBASIC24.48■■□□□ 1.51
SBNO1A3KN83 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 MIR3197-201ENST00000582241 73 ntBASIC24.48■■□□□ 1.51
SBNO1A3KN83 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.48■■□□□ 1.51
SBNO1A3KN83 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SBNO1A3KN83 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24.48■■□□□ 1.51
SBNO1A3KN83 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 KRT18P2-201ENST00000447938 1258 ntBASIC24.47■■□□□ 1.51
SBNO1A3KN83 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 ALG1L5P-201ENST00000482043 771 ntBASIC24.47■■□□□ 1.51
SBNO1A3KN83 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SBNO1A3KN83 AC116562.4-201ENST00000641316 2276 ntBASIC24.47■■□□□ 1.51
SBNO1A3KN83 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC24.47■■□□□ 1.51
SBNO1A3KN83 AC097374.2-201ENST00000618617 1306 ntBASIC24.47■■□□□ 1.51
SBNO1A3KN83 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SBNO1A3KN83 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SBNO1A3KN83 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SBNO1A3KN83 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 AC005593.1-201ENST00000624894 515 ntBASIC24.46■■□□□ 1.51
SBNO1A3KN83 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 AL499627.1-201ENST00000569373 2188 ntBASIC24.46■■□□□ 1.51
SBNO1A3KN83 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SBNO1A3KN83 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SBNO1A3KN83 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.46■■□□□ 1.51
SBNO1A3KN83 SIGLEC16-201ENST00000599858 1437 ntBASIC24.46■■□□□ 1.51
SBNO1A3KN83 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms