Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KRT8P32-201ENST00000512863 1461 ntBASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 STARP1-201ENST00000397973 869 ntBASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KRT18P38-201ENST00000449496 1282 ntBASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 VENTXP5-201ENST00000523979 775 ntBASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MIR3180-5-201ENST00000583743 153 ntBASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KRT8P3-201ENST00000519669 1449 ntBASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.63□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FAM86EP-206ENST00000510506 987 ntBASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC036111.1-201ENST00000533973 1582 ntBASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LINC01311-201ENST00000565162 1445 ntBASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms