Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC012317.2-201ENST00000623305 2251 ntBASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 LINC01023-201ENST00000606054 436 ntBASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 KRT18P38-201ENST00000449496 1282 ntBASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC034232.1-201ENST00000506026 1064 ntBASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AL391807.1-203ENST00000604392 2365 ntBASIC16.04■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 LINC00167-201ENST00000530583 1419 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SLC25A6P5-201ENST00000435663 894 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC092597.1-201ENST00000487352 616 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AL031432.5-201ENST00000641059 760 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 AC100803.2-201ENST00000562459 1963 ntBASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV1D-43A0A0B4J1Z2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms