Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 NEK4P2-201ENST00000580004 1012 ntBASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 AC139713.2-201ENST00000641328 2723 ntBASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DRB4X5D2U9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HLA-DRB4X5D2U9 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AC009947.2-201ENST00000444014 672 ntBASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AC133561.5-201ENST00000635547 218 ntBASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DRB4X5D2U9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 ECEL1P3-201ENST00000427961 737 ntBASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 SLC25A3P1-201ENST00000443844 931 ntBASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 MIR3180-4-201ENST00000582223 153 ntBASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DRB4X5D2U9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms