Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 MYLKP1-201ENST00000509077 1580 ntBASIC17.24■□□□□ 0.35
GPC6Q9Y625 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 AC135776.1-201ENST00000319817 2481 ntBASIC17.24■□□□□ 0.35
GPC6Q9Y625 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 MFAP1P1-201ENST00000442257 1255 ntBASIC17.24■□□□□ 0.35
GPC6Q9Y625 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 AL355075.4-201ENST00000554988 638 ntBASIC17.24■□□□□ 0.35
GPC6Q9Y625 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 OR6D1P-202ENST00000641007 5290 ntBASIC17.24■□□□□ 0.35
GPC6Q9Y625 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.24■□□□□ 0.35
GPC6Q9Y625 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 PCDHA12-202ENST00000613593 2588 ntBASIC17.23■□□□□ 0.35
GPC6Q9Y625 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 CRYGFP-201ENST00000418459 633 ntBASIC17.23■□□□□ 0.35
GPC6Q9Y625 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.23■□□□□ 0.35
GPC6Q9Y625 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GPC6Q9Y625 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
GPC6Q9Y625 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC6Q9Y625 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC6Q9Y625 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms