Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 HMGA1P5-201ENST00000412453 271 ntBASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 NEK4P2-201ENST00000580004 1012 ntBASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 AC010947.1-201ENST00000623454 693 ntBASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNPO3Q9Y5L0 AL024508.2-201ENST00000607749 1894 ntBASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 AP000997.3-201ENST00000623333 2250 ntBASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNPO3Q9Y5L0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 INGX-201ENST00000359239 846 ntBASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 AP000523.1-201ENST00000398242 1049 ntBASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 AC009947.2-201ENST00000444014 672 ntBASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 SEC1P-202ENST00000473944 940 ntBASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNPO3Q9Y5L0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNPO3Q9Y5L0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNPO3Q9Y5L0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.73■□□□□ 0.43
TNPO3Q9Y5L0 KRT18P55-202ENST00000578578 1546 ntBASIC17.73■□□□□ 0.43
TNPO3Q9Y5L0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNPO3Q9Y5L0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms