Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA9Q9Y5G4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 AL161938.1-201ENST00000569833 2180 ntBASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 AC005332.8-201ENST00000622750 2735 ntBASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA9Q9Y5G4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 NSUN5P1-202ENST00000421140 1535 ntBASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 NSUN5P2-203ENST00000457352 1529 ntBASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 AC079776.4-201ENST00000511039 504 ntBASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 BX640515.1-201ENST00000617215 977 ntBASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 AL390961.4-201ENST00000623958 2535 ntBASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA9Q9Y5G4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms