Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 AL023284.2-201ENST00000405850 579 ntBASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 VENTXP5-201ENST00000523979 775 ntBASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 AC083849.1-201ENST00000615227 514 ntBASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB6Q9Y5F9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 MCCD1P1-208ENST00000445732 328 ntBASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 LINC01311-201ENST00000565162 1445 ntBASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB6Q9Y5F9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 AC099398.1-201ENST00000567919 2776 ntBASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB6Q9Y5F9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms