Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB9Q9Y5E1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
PCDHB9Q9Y5E1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.46■□□□□ 0.54
PCDHB9Q9Y5E1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHB9Q9Y5E1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 KRT8P26-201ENST00000534154 1276 ntBASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 MIR3180-1-201ENST00000580374 94 ntBASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 MIR3180-3-201ENST00000584616 94 ntBASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 AL121772.3-201ENST00000610840 674 ntBASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 KRT18P1-202ENST00000452408 1331 ntBASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB9Q9Y5E1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 AL022342.1-201ENST00000400363 863 ntBASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 AC023511.2-201ENST00000618803 211 ntBASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 HCG11-201ENST00000411553 5696 ntBASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB9Q9Y5E1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 CHCHD2P8-201ENST00000429873 447 ntBASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 EMBP1-201ENST00000458200 901 ntBASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AC091304.2-201ENST00000564639 760 ntBASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AC006538.3-201ENST00000612495 578 ntBASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AL024508.2-201ENST00000607749 1894 ntBASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB9Q9Y5E1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms