Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.62■□□□□ 0.25
TPRKBQ9Y3C4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 AP000593.1-201ENST00000393668 712 ntBASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 BX276092.2-201ENST00000417668 665 ntBASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 NFIC-211ENST00000641145 8399 ntBASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPRKBQ9Y3C4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 AC133552.2-202ENST00000575694 574 ntBASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 AC092437.1-201ENST00000624794 1048 ntBASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 RCC2P3-201ENST00000418112 1537 ntBASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPRKBQ9Y3C4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPRKBQ9Y3C4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms