Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 AC140113.3-201ENST00000605663 199 ntBASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 AC097493.4-201ENST00000641197 219 ntBASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 LINC01126-201ENST00000623515 1646 ntBASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 AC005363.2-201ENST00000618631 242 ntBASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 AC133561.5-201ENST00000635547 218 ntBASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS9D1Q9Y2B5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.08■□□□□ 0.49
VPS9D1Q9Y2B5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 AC113347.1-201ENST00000413321 391 ntBASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 COX11P1-201ENST00000489116 835 ntBASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 RN7SL275P-201ENST00000582762 335 ntBASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS9D1Q9Y2B5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 AC099343.3-201ENST00000605834 2503 ntBASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 AL137013.1-201ENST00000432946 1228 ntBASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 MTND2P7-201ENST00000521337 640 ntBASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS9D1Q9Y2B5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms