Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AC018695.7-201ENST00000624587 2492 ntBASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 MESTP1-201ENST00000404287 994 ntBASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HHLA3Q9XRX5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HHLA3Q9XRX5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 UNC93B2-201ENST00000285383 730 ntBASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 TSPY7P-201ENST00000431358 1114 ntBASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HHLA3Q9XRX5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HHLA3Q9XRX5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms