Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 IGHV3-47-201ENST00000425060 335 ntBASIC19.17■□□□□ 0.66
CDH9Q9ULB4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 AC091607.1-201ENST00000490318 1060 ntBASIC19.17■□□□□ 0.66
CDH9Q9ULB4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 AP005901.3-202ENST00000581653 237 ntBASIC19.17■□□□□ 0.66
CDH9Q9ULB4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH9Q9ULB4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 AC093677.2-201ENST00000600169 1863 ntBASIC19.16■□□□□ 0.66
CDH9Q9ULB4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 AC090164.3-201ENST00000610780 2143 ntBASIC19.16■□□□□ 0.66
CDH9Q9ULB4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDH9Q9ULB4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 NSUN5P1-202ENST00000421140 1535 ntBASIC19.15■□□□□ 0.66
CDH9Q9ULB4 NSUN5P2-203ENST00000457352 1529 ntBASIC19.15■□□□□ 0.66
CDH9Q9ULB4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH9Q9ULB4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
CDH9Q9ULB4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH9Q9ULB4 AL450487.1-201ENST00000426799 995 ntBASIC19.14■□□□□ 0.65
CDH9Q9ULB4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms