Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CISHQ9NSE2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.39■□□□□ 0.69
CISHQ9NSE2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 IGHGP-201ENST00000390555 1178 ntBASIC19.38■□□□□ 0.69
CISHQ9NSE2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 FAM86EP-206ENST00000510506 987 ntBASIC19.38■□□□□ 0.69
CISHQ9NSE2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.38■□□□□ 0.69
CISHQ9NSE2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CISHQ9NSE2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 AC005332.3-201ENST00000589904 676 ntBASIC19.37■□□□□ 0.69
CISHQ9NSE2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 AC004263.2-201ENST00000617183 678 ntBASIC19.37■□□□□ 0.69
CISHQ9NSE2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CISHQ9NSE2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CISHQ9NSE2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 AC005332.1-201ENST00000577698 1310 ntBASIC19.36■□□□□ 0.69
CISHQ9NSE2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 GPR32P1-201ENST00000601788 811 ntBASIC19.36■□□□□ 0.69
CISHQ9NSE2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.36■□□□□ 0.69
CISHQ9NSE2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.36■□□□□ 0.69
CISHQ9NSE2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CISHQ9NSE2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms