Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 AC079781.5-202ENST00000641784 3743 ntBASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 AC067750.1-201ENST00000608826 6545 ntBASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
CDC42SE1Q9NRR8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AL391807.1-203ENST00000604392 2365 ntBASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 KRT18P10-201ENST00000388836 1287 ntBASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 PTENP1-202ENST00000532280 3996 ntBASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms